Basic macro that will work when master is dead?

[Peli]

I do switch to the other character but all his abilities have the macro I mentioned above which means when I hit the key for that ability he does nothing.

Are you saying the way you do it is you hit one button that gets all slaves targetting the master's target and then use regular ability keybinds or macros that a single-character player would use?

If you run a FTL system (like what works out of the box with ISBoxer), you don't need to include the targeting portions of the macros.