i think Khatovar nailed it. it sounds like the regions are not specified properly

what version are you using?

make sure to use v1.9i (or later). there is a setup wizard that will take care of most of the setup issues for you. takes like a minute to type in your account names and let the wizard do the rest.

and no, you should not have to run your wows manually. you should just let keyclone start them all for you, then position them.

let me know how it goes,

Rob