the auto-add feature will add any window that has the same title.

if you are launching your wows using a desktop icon, when you select it, that title will be grabbed by keyclone for the desktop IE, as the name on the shortcut becomes the title.

you can check the 'exact match' and then tweak the shortcut name... or better yet, use commands to launch your wows and uncheck the auto-add capability. there is no need to manually add a wow window.