X-Keys USB problem

I just switched over to a new computer and am having some problems with setting up my X-Keys USB again. If I setup a key as something simple like "A" it works just fine and WoW picks up the keystroke just fine. But when I set it up for something like Alt+A , Shift+A or Alt+Shift+A I run into problems. The keystroke is not being passed correctlly. The only thing I can say for what I am seeing is that the macaroon button I have setup as Alt+Shift+A will get a light gray border around it like it does if you were to manually click on it and then never release the mouse click. Any suggestions would be awesome as this is getting kinda frustrating. Also if I turn on the "Enable Button Down Clicks" option in macaroon press the X-Keys button tied to Alt+Shift+A change window focus to something else such as my web browser and refocus on the WoW window and hit the XKeys button again it will act as a single click but only the once.

*Update*
So I have found that I can hit my Xkeys button mapped with Alt+Shift+A and then right after hit the A key on my keyboard and the macro will trigger O.o

What version macroworks are you running on new computer? What version were you running on old computer? And did you just copy and paste your old .mws file over? I switched all my x-keys to new computers and when I did, I downloaded and used the new macroworks program, then copy/pasted all my new comps with the old .mws files instead of reprogramming each comp (or one and copy/paste). Some buttons worked fine, some worked strangely, some didn't work at all. Was more trouble to reprogram a new layout, so I went back to the old macroworks....version 1.0.0.0 and now everything works fine

I was previously using 1.0.1.0 and am now using 1.0.1.2. I did not copy over my old layout as I took this to be a good time to redo my button layout.